Transcript: ENST00000296411.6 METAP1-001

Description

methionyl aminopeptidase 1 [Source:HGNC Symbol;Acc:15789]

Gene Synonyms

KIAA0094, MAP1A, MetAP1A

Location

Chromosome 4: 99,916,771-99,983,964 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 12 domains and features, is associated with 27873 variant alleles and maps to 535 oligo probes.

Gene

This transcript is a product of gene ENSG00000164024.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000296411.6	METAP1-001	2791	386aa	ENSP00000296411.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47110	P53582	NM_015143.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000544031.1	METAP1-201	2502	336aa	ENSP00000440993.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GXS7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000514051.1	METAP1-002	1058	116aa	ENSP00000422689.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0Y903	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000510133.1	METAP1-011	715	170aa	ENSP00000423071.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0Y955	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000510107.1	METAP1-007	770	38aa	ENSP00000427187.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000507537.1	METAP1-004	718	48aa	ENSP00000427563.1	Nonsense mediated decay		D6RF24 H0Y9L0	-	-
ENST00000503247.1	METAP1-006	653	44aa	ENSP00000424462.1	Nonsense mediated decay		H0Y9L0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000506238.1	METAP1-005	553	48aa	ENSP00000426702.1	Nonsense mediated decay		D6RF24 H0Y9L0	-	-
ENST00000506548.1	METAP1-009	714	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000513199.1	METAP1-008	613	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000510209.1	METAP1-003	559	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000513097.1	METAP1-010	586	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 2,791 bps, Translation length: 386 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P53582

CCDS

This transcript is a member of the Human CCDS set: CCDS47110

Version

ENST00000296411.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000364237 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000296411.6 METAP1-001

Summary