Transcript: ENST00000296333.5 PIGX-001

Description

phosphatidylinositol glycan anchor biosynthesis, class X [Source:HGNC Symbol;Acc:26046]

Gene Synonyms

FLJ20522, PIG-X

Location

Chromosome 3: 196,439,282-196,460,773 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 6 domains and features, is associated with 9691 variant alleles and maps to 341 oligo probes.

Gene

This transcript is a product of gene ENSG00000163964.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000296333.5	PIGX-001	953	276aa	ENSP00000296333.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54701	B4DFZ9 C9JF71 H0Y2P9	NM_001166304.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENST00000392391.3	PIGX-002	3057	258aa	ENSP00000376192.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3320	A8MSL3 C9JF71 C9JLT7 Q8TBF5	-	-
ENST00000314118.4	PIGX-201	3018	217aa	ENSP00000317301.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MSL3 C9JF71 C9JLT7	NM_017861.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000541663.1	PIGX-202	1677	168aa	ENSP00000443269.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DFZ9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000451319.1	PIGX-006	838	127aa	ENSP00000390804.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JF71	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000426755.1	PIGX-009	744	170aa	ENSP00000409073.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JF71 C9JLT7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000421265.1	PIGX-008	677	150aa	ENSP00000416446.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JF71 C9JFU3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000415832.1	PIGX-003	1677	79aa	ENSP00000413672.1	Nonsense mediated decay		F8WEJ3	-	-
ENST00000453218.2	PIGX-004	1068	63aa	ENSP00000393424.2	Nonsense mediated decay		H7C081	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000457284.1	PIGX-005	523	111aa	ENSP00000394722.1	Nonsense mediated decay		F8WEJ3 H7C0F2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000495440.1	PIGX-007	755	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 953 bps, Translation length: 276 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS54701

Version

ENST00000296333.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000340552 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000296333.5 PIGX-001

Summary