Transcript: ENST00000394738.3 RFT1-002

Description

RFT1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:30220]

Gene Synonyms

CDG1N

Location

About this transcript

This transcript has 12 exons, is annotated with 18 domains and features, is associated with 16353 variant alleles and maps to 359 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000296292.3	RFT1-001	5108	541aa	ENSP00000296292.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2869	Q96AA3	NM_052859.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394738.3	RFT1-002	1800	502aa	ENSP00000378223.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B5MDE0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000467048.1	RFT1-005	886	291aa	ENSP00000420325.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JP01	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000471158.1	RFT1-004	924	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 1,800 bps, Translation length: 502 residues

Version

ENST00000394738.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000157137 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.