Transcript: ENST00000469912.1 LRRC2-004

Description

leucine rich repeat containing 2 [Source:HGNC Symbol;Acc:14676]

Location

About this transcript

This transcript has 2 exons, is associated with 6230 variant alleles and maps to 68 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000395905.3	LRRC2-001	5100	371aa	ENSP00000379241.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2741	Q9BYS8	NM_024512.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000296144.3	LRRC2-002	1963	371aa	ENSP00000296144.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2741	Q9BYS8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000496388.1	LRRC2-003	451	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000469912.1	LRRC2-004	561	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 561 bps,

Version

ENST00000469912.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000344227 (version 1)