Transcript: ENST00000296144.3 LRRC2-002

Description

leucine rich repeat containing 2 [Source:HGNC Symbol;Acc:14676]

Location

About this transcript

This transcript has 9 exons, is annotated with 18 domains and features, is associated with 26360 variant alleles and maps to 310 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000395905.3	LRRC2-001	5100	371aa	ENSP00000379241.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2741	Q9BYS8	NM_024512.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000296144.3	LRRC2-002	1963	371aa	ENSP00000296144.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2741	Q9BYS8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000496388.1	LRRC2-003	451	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000469912.1	LRRC2-004	561	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 1,963 bps, Translation length: 371 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BYS8

CCDS

This transcript is a member of the Human CCDS set: CCDS2741

Version

ENST00000296144.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000344225 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.