Transcript: ENST00000492196.1 SLC4A1AP-002

Description

solute carrier family 4 (anion exchanger), member 1, adaptor protein [Source:HGNC Symbol;Acc:13813]

Gene Synonyms

HLC3, kanadaptin

Location

About this transcript

This transcript has 2 exons, is associated with 1310 variant alleles and maps to 167 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000326019.6	SLC4A1AP-001	2959	796aa	ENSP00000323837.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33166	B4DV74 Q9BWU0	NM_018158.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000427424.1	SLC4A1AP-003	906	157aa	ENSP00000404129.1	Nonsense mediated decay		H7C256	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000492196.1	SLC4A1AP-002	2537	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 2,537 bps,

Version

ENST00000492196.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000324551 (version 1)