Transcript: ENST00000295926.3 CCNL1-001

Description

cyclin L1 [Source:HGNC Symbol;Acc:20569]

Gene Synonyms

ANIA6A, PRO1073, ania-6a

Location

Chromosome 3: 156,865,342-156,878,002 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 18 domains and features, is associated with 5853 variant alleles and maps to 523 oligo probes.

Gene

This transcript is a product of gene ENSG00000163660.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000295926.3	CCNL1-001	2388	526aa	ENSP00000295926.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3178	Q9UK58	NM_020307.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000461804.1	CCNL1-002	1998	428aa	ENSP00000420277.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JPL0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000295925.4	CCNL1-201	1118	172aa	ENSP00000295925.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9UK58	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000475298.1	CCNL1-003	2362	172aa	ENSP00000417343.1	Nonsense mediated decay		Q9UK58	-	-
ENST00000470121.1	CCNL1-005	1889	232aa	ENSP00000417237.1	Nonsense mediated decay		Q9UK58	-	-
ENST00000477127.1	CCNL1-009	1464	172aa	ENSP00000418449.1	Nonsense mediated decay		Q9UK58	-	-
ENST00000468977.1	CCNL1-020	793	59aa	ENSP00000417218.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000465947.1	CCNL1-012	793	172aa	ENSP00000418094.1	Nonsense mediated decay		Q9UK58	-	-
ENST00000479052.1	CCNL1-017	458	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000474539.1	CCNL1-007	4799	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000464316.1	CCNL1-006	3843	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000471247.1	CCNL1-008	3671	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000476367.1	CCNL1-004	1603	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000476744.1	CCNL1-021	1029	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000466101.1	CCNL1-011	911	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000479596.1	CCNL1-013	883	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000495471.1	CCNL1-023	772	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000471044.1	CCNL1-010	753	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000483789.1	CCNL1-018	667	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000467849.1	CCNL1-022	586	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000478454.1	CCNL1-016	580	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000481173.1	CCNL1-024	571	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000467081.1	CCNL1-014	564	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000464679.1	CCNL1-019	534	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000464575.1	CCNL1-015	505	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 2,388 bps, Translation length: 526 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UK58

CCDS

This transcript is a member of the Human CCDS set: CCDS3178

Version

ENST00000295926.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000351859 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000295926.3 CCNL1-001

Summary