Transcript: ENST00000295756.6 TRAT1-001

Description

T cell receptor associated transmembrane adaptor 1 [Source:HGNC Symbol;Acc:30698]

Gene Synonyms

HSPC062, TCRIM, TRIM

Location

About this transcript

This transcript has 6 exons, is annotated with 4 domains and features, is associated with 13667 variant alleles and maps to 358 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000295756.6	TRAT1-001	1919	186aa	ENSP00000295756.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33813	Q6PIZ9	NM_016388.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000426646.1	TRAT1-002	1596	149aa	ENSP00000410097.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JF66	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000493604.1	TRAT1-004	620	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000478830.1	TRAT1-005	579	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484927.1	TRAT1-003	547	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,919 bps, Translation length: 186 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6PIZ9

CCDS

This transcript is a member of the Human CCDS set: CCDS33813

Version

ENST00000295756.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000353794 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.