Transcript: ENST00000368457.2 PYGO2-001

Description

pygopus family PHD finger 2 [Source:HGNC Symbol;Acc:30257]

Gene Synonyms

1190004M21Rik

Location

About this transcript

This transcript has 3 exons, is annotated with 13 domains and features, is associated with 2564 variant alleles and maps to 346 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000368457.2	PYGO2-001	3146	406aa	ENSP00000357442.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1075	Q5T170 Q5T171 Q9BRQ0	NM_138300.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000368456.1	PYGO2-002	1306	369aa	ENSP00000357441.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T171	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000483463.1	PYGO2-003	594	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 3,146 bps, Translation length: 406 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BRQ0

CCDS

This transcript is a member of the Human CCDS set: CCDS1075

Version

ENST00000368457.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000090949 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.