Transcript: ENST00000359650.5 PGLYRP4-001

Description

peptidoglycan recognition protein 4 [Source:HGNC Symbol;Acc:30015]

Gene Synonyms

PGLYRPIbeta, PGRP-Ibeta, PGRPIB, SBBI67

Location

About this transcript

This transcript has 9 exons, is annotated with 13 domains and features, is associated with 8571 variant alleles and maps to 365 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000359650.5	PGLYRP4-001	1834	373aa	ENSP00000352672.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30871	Q96LB8	NM_020393.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000368739.3	PGLYRP4-002	2116	369aa	ENSP00000357728.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96LB8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000490266.1	PGLYRP4-003	531	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 1,834 bps, Translation length: 373 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96LB8

CCDS

This transcript is a member of the Human CCDS set: CCDS30871

Version

ENST00000359650.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000089978 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.