Transcript: ENST00000453555.1 CDC42EP3-006

Description

CDC42 effector protein (Rho GTPase binding) 3 [Source:HGNC Symbol;Acc:16943]

Gene Synonyms

BORG2, CEP3, UB1

Location

Chromosome 2: 37,873,627-37,965,611 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 3 domains and features, is associated with 43752 variant alleles and maps to 190 oligo probes.

Gene

This transcript is a product of gene ENSG00000163171.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000295324.3	CDC42EP3-001	5700	254aa	ENSP00000295324.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1791	C9J7F7 C9JEZ4 Q9UKI2	NM_006449.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000457889.1	CDC42EP3-002	997	215aa	ENSP00000403298.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J7F7 C9JEZ4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000453555.1	CDC42EP3-006	953	34aa	ENSP00000398062.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J7F7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000422687.1	CDC42EP3-005	542	14aa	ENSP00000409147.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000494083.1	CDC42EP3-007	3726	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 1, Transcript length: 953 bps, Translation length: 34 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000453555.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000326761 (version 1)

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Transcript: ENST00000453555.1 CDC42EP3-006

Summary