Transcript: ENST00000506331.1 HPGDS-002

Description

hematopoietic prostaglandin D synthase [Source:HGNC Symbol;Acc:17890]

Gene Synonyms

GSTS, GSTS1-1, H-PGDS, PGD2, PGDS, PTGDS2

Location

About this transcript

This transcript has 2 exons, is associated with 4465 variant alleles and maps to 70 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000295256.5	HPGDS-001	1636	199aa	ENSP00000295256.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3640	O60760 Q4W5C6	NM_014485.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000514774.1	HPGDS-003	575	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000506331.1	HPGDS-002	540	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 540 bps,

Version

ENST00000506331.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000362982 (version 1)