Transcript: ENST00000295256.5 HPGDS-001

Description

hematopoietic prostaglandin D synthase [Source:HGNC Symbol;Acc:17890]

Gene Synonyms

GSTS, GSTS1-1, H-PGDS, PGD2, PGDS, PTGDS2

Location

About this transcript

This transcript has 6 exons, is annotated with 10 domains and features, is associated with 22296 variant alleles and maps to 331 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000295256.5	HPGDS-001	1636	199aa	ENSP00000295256.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3640	O60760 Q4W5C6	NM_014485.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000514774.1	HPGDS-003	575	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000506331.1	HPGDS-002	540	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,636 bps, Translation length: 199 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O60760

CCDS

This transcript is a member of the Human CCDS set: CCDS3640

Version

ENST00000295256.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000253587 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.