Transcript: ENST00000609196.1 ACP6-005

Description

acid phosphatase 6, lysophosphatidic [Source:HGNC Symbol;Acc:29609]

Gene Synonyms

ACPL1, LPAP, PACPL1

Location

Chromosome 1: 147,101,453-147,131,116 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 5 domains and features, is associated with 11063 variant alleles and maps to 240 oligo probes.

Gene

This transcript is a product of gene ENSG00000162836.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000369238.6	ACP6-001	6926	428aa	ENSP00000358241.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS928	Q9NPH0	NM_016361.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000609196.1	ACP6-005	1874	160aa	ENSP00000477476.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000392988.2	ACP6-201	1010	271aa	ENSP00000376714.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9NPH0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000460583.1	ACP6-003	905	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000487562.1	ACP6-004	559	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000493129.1	ACP6-002	519	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,874 bps, Translation length: 160 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000609196.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Stop codons

This transcript has a variant, rs12037951, that causes a stop codon to be gained in at least 10% of HapMap or 1000 Genome population(s) CSHL-HAPMAP:HapMap-HCB, CSHL-HAPMAP:HAPMAP-CHB, CSHL-HAPMAP:HAPMAP-CHD, CSHL-HAPMAP:HAPMAP-TSI, CSHL-HAPMAP:HAPMAP-GIH, CSHL-HAPMAP:HapMap-JPT, CSHL-HAPMAP:HapMap-CEU.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000473109 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000609196.1 ACP6-005

Summary