Transcript: ENST00000602490.1 ARPC5-005

Description

actin related protein 2/3 complex, subunit 5, 16kDa [Source:HGNC Symbol;Acc:708]

Gene Synonyms

ARC16, dJ127C7.3, p16-Arc

Location

Chromosome 1: 183,599,460-183,602,444 reverse strand.

About this transcript

This transcript has 1 exon, is associated with 1348 variant alleles and maps to 112 oligo probes.

Gene

This transcript is a product of gene ENSG00000162704.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000294742.6	ARPC5-002	1637	154aa	ENSP00000294742.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58050	O15511	NM_001270439.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000359856.6	ARPC5-001	1838	151aa	ENSP00000352918.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1357	O15511	NM_005717.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367534.1	ARPC5-004	622	135aa	ENSP00000356504.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1ALC0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000462965.1	ARPC5-003	2455	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000602490.1	ARPC5-005	2985	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 1, Coding exons: 0, Transcript length: 2,985 bps,

Version

ENST00000602490.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000467671 (version 1)

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Transcript: ENST00000602490.1 ARPC5-005

Summary