Transcript: ENST00000370332.1 GFI1-001

Description

growth factor independent 1 transcription repressor [Source:HGNC Symbol;Acc:4237]

Gene Synonyms

GFI-1, GFI1A, SCN2, ZNF163

Location

About this transcript

This transcript has 7 exons, is annotated with 37 domains and features, is associated with 4527 variant alleles and maps to 446 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000370332.1	GFI1-001	2855	422aa	ENSP00000359357.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30773	D3DT36 Q99684	NM_001127215.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000294702.5	GFI1-002	2784	422aa	ENSP00000294702.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30773	D3DT36 Q99684	NM_005263.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000427103.1	GFI1-201	2693	422aa	ENSP00000399719.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30773	D3DT36 Q99684	NM_001127216.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000483490.1	GFI1-003	508	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 2,855 bps, Translation length: 422 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q99684

CCDS

This transcript is a member of the Human CCDS set: CCDS30773

Version

ENST00000370332.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000030054 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.