Transcript: ENST00000370466.3 GBP2-002

Description

guanylate binding protein 2, interferon-inducible [Source:HGNC Symbol;Acc:4183]

Location

About this transcript

This transcript has 11 exons, is annotated with 12 domains and features, is associated with 7423 variant alleles and maps to 431 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000370466.3	GBP2-002	2220	591aa	ENSP00000359497.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS719	P32456 Q8TCE5	NM_004120.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000464839.1	GBP2-001	3687	591aa	ENSP00000434282.1	Nonsense mediated decay	CCDS719	P32456 Q8TCE5	-	-
ENST00000463660.1	GBP2-003	3461	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000493802.1	GBP2-004	794	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 2,220 bps, Translation length: 591 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P32456

CCDS

This transcript is a member of the Human CCDS set: CCDS719

Version

ENST00000370466.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000029406 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.