Transcript: ENST00000529992.1 SNX7-005

Description

sorting nexin 7 [Source:HGNC Symbol;Acc:14971]

Location

Chromosome 1: 99,127,257-99,226,054 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 7 domains and features, is associated with 41162 variant alleles and maps to 526 oligo probes.

Gene

This transcript is a product of gene ENSG00000162627.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000306121.3	SNX7-001	1734	451aa	ENSP00000304429.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS755	B7ZC83 Q9UNH6	NM_015976.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000370189.5	SNX7-201	1742	336aa	ENSP00000359208.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7ZC83 Q9UNH6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000529992.1	SNX7-005	1589	396aa	ENSP00000434731.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS756	B4DP69 E9PNL2	NM_152238.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000454199.1	SNX7-004	497	108aa	ENSP00000388266.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7ZC83	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000528824.1	SNX7-002	1562	36aa	ENSP00000435172.1	Nonsense mediated decay		E9PLE1	-	-
ENST00000473868.1	SNX7-003	253	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,589 bps, Translation length: 396 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS756

Version

ENST00000529992.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000395126 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000529992.1 SNX7-005

Summary