Transcript: ENST00000473868.1 SNX7-003

Description

sorting nexin 7 [Source:HGNC Symbol;Acc:14971]

Location

Chromosome 1: 99,127,366-99,142,887 forward strand.

About this transcript

This transcript has 3 exons, is associated with 6805 variant alleles and maps to 103 oligo probes.

Gene

This transcript is a product of gene ENSG00000162627.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000306121.3	SNX7-001	1734	451aa	ENSP00000304429.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS755	B7ZC83 Q9UNH6	NM_015976.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000370189.5	SNX7-201	1742	336aa	ENSP00000359208.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7ZC83 Q9UNH6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000529992.1	SNX7-005	1589	396aa	ENSP00000434731.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS756	B4DP69 E9PNL2	NM_152238.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000454199.1	SNX7-004	497	108aa	ENSP00000388266.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7ZC83	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000528824.1	SNX7-002	1562	36aa	ENSP00000435172.1	Nonsense mediated decay		E9PLE1	-	-
ENST00000473868.1	SNX7-003	253	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 253 bps,

Version

ENST00000473868.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000343385 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000473868.1 SNX7-003

Summary