Transcript: ENST00000401035.3 NEXN-002

Description

nexilin (F actin binding protein) [Source:HGNC Symbol;Acc:29557]

Gene Synonyms

CMH20, NELIN, nexilin

Location

Chromosome 1: 78,354,198-78,399,069 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 10 domains and features, is associated with 18225 variant alleles and maps to 285 oligo probes.

Gene

This transcript is a product of gene ENSG00000162614.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000334785.7	NEXN-001	2607	675aa	ENSP00000333938.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41351	B4DDI0 Q0ZGT2	NM_144573.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000330010.8	NEXN-202	3195	611aa	ENSP00000327363.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53335	B4DDI0 E7ETM8 Q0ZGT2	NM_001172309.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000342754.5	NEXN-005	2712	576aa	ENSP00000343928.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000457030.1	NEXN-203	2286	662aa	ENSP00000388048.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EUA0 Q0ZGT2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000440324.1	NEXN-003	1456	435aa	ENSP00000411902.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EUA0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000401035.3	NEXN-002	1263	321aa	ENSP00000383814.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ETM8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000294624.8	NEXN-201	842	159aa	ENSP00000294624.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EQF0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000480732.2	NEXN-004	1972	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000464998.1	NEXN-007	859	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000470735.1	NEXN-006	791	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 1,263 bps, Translation length: 321 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000401035.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000097550 (version 1)

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Transcript: ENST00000401035.3 NEXN-002

Summary