Transcript: ENST00000371201.3 C1orf87-001

Description

chromosome 1 open reading frame 87 [Source:HGNC Symbol;Acc:28547]

Gene Synonyms

MGC34837

Location

Chromosome 1: 60,456,066-60,539,442 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 9 domains and features, is associated with 36351 variant alleles and maps to 436 oligo probes.

Gene

This transcript is a product of gene ENSG00000162598.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000371201.3	C1orf87-001	2028	546aa	ENSP00000360244.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS614	Q8N0U7	NM_152377.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000450089.2	C1orf87-003	1307	317aa	ENSP00000389432.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JPP7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395552.1	C1orf87-201	818	180aa	ENSP00000378921.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8N0U7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000486478.1	C1orf87-002	3012	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000488027.1	C1orf87-005	858	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000491817.2	C1orf87-004	497	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 2,028 bps, Translation length: 546 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8N0U7

CCDS

This transcript is a member of the Human CCDS set: CCDS614

Version

ENST00000371201.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000024943 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000371201.3 C1orf87-001

Summary