Transcript: ENST00000379099.3 SCNN1D-005

Description

sodium channel, non-voltage-gated 1, delta subunit [Source:HGNC Symbol;Acc:10601]

Gene Synonyms

DNACH, ENaCd, ENaCdelta, SCNED, dNaCh

Location

Chromosome 1: 1,222,489-1,226,323 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 15 domains and features, is associated with 4941 variant alleles and maps to 439 oligo probes.

Gene

This transcript is a product of gene ENSG00000162572.15 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000379116.5	SCNN1D-008	3044	802aa	ENSP00000368411.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44037	A6NNF7	NM_001130413.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000338555.2	SCNN1D-001	3475	638aa	ENSP00000339504.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P51172	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000325425.8	SCNN1D-003	2679	704aa	ENSP00000321594.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P51172	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000400928.3	SCNN1D-201	2503	638aa	ENSP00000383717.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P51172	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000379099.3	SCNN1D-005	923	308aa	ENSP00000368393.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000470022.1	SCNN1D-006	645	139aa	ENSP00000420548.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JDY8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000379101.4	SCNN1D-002	2268	328aa	ENSP00000449804.1	Nonsense mediated decay		F8VWH5	-	-
ENST00000467651.2	SCNN1D-007	204	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 923 bps, Translation length: 308 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENST00000379099.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000005804 (version 1)

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Transcript: ENST00000379099.3 SCNN1D-005

Summary