Transcript: ENST00000471889.1 SLC45A1-001

Description

solute carrier family 45, member 1 [Source:HGNC Symbol;Acc:17939]

Gene Synonyms

DNB5

Location

Chromosome 1: 8,377,886-8,404,225 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 26 domains and features, is associated with 13399 variant alleles and maps to 378 oligo probes.

Gene

This transcript is a product of gene ENSG00000162426.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000471889.1	SLC45A1-001	2784	748aa	ENSP00000418096.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30577	Q9Y2W3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000377479.2	SLC45A1-202	2503	782aa	ENSP00000366699.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000289877.8	SLC45A1-201	2401	748aa	ENSP00000289877.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30577	Q9Y2W3	NM_001080397.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000481265.1	SLC45A1-005	694	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497660.1	SLC45A1-002	1747	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 2,784 bps, Translation length: 748 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y2W3

CCDS

This transcript is a member of the Human CCDS set: CCDS30577

Version

ENST00000471889.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000001245 (version 5)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000471889.1 SLC45A1-001

Summary