Transcript: ENST00000371871.4 CMPK1-004

Description

cytidine monophosphate (UMP-CMP) kinase 1, cytosolic [Source:HGNC Symbol;Acc:18170]

Gene Synonyms

CK, CMK, CMPK, UCK, UMK, UMP-CMPK, UMPK

Location

About this transcript

This transcript has 5 exons, is annotated with 11 domains and features, is associated with 18666 variant alleles and maps to 245 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000371873.5	CMPK1-001	2930	228aa	ENSP00000360939.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS549	B2R6S5 P30085	NM_016308.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000450808.2	CMPK1-005	950	179aa	ENSP00000398192.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44135	P30085	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000471289.2	CMPK1-002	816	58aa	ENSP00000433782.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJD2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000371871.4	CMPK1-004	1212	169aa	ENSP00000360937.4	Nonsense mediated decay		Q5T0D2	-	-
ENST00000371870.3	CMPK1-003	812	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 1,212 bps, Translation length: 169 residues

Version

ENST00000371871.4

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000100397 (version 2)