Transcript: ENST00000572265.1 ALOX15-005

Description

arachidonate 15-lipoxygenase [Source:HGNC Symbol;Acc:433]

Gene Synonyms

12-LOX, 15-LOX-1, 15LOX-1, LOG15

Location

Chromosome 17: 4,542,222-4,543,177 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 656 variant alleles and maps to 131 oligo probes.

Gene

This transcript is a product of gene ENSG00000161905.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000570836.1	ALOX15-001	2784	662aa	ENSP00000458832.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11049	D3DTK1 I3L175 P16050	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000293761.3	ALOX15-201	2677	662aa	ENSP00000293761.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11049	D3DTK1 I3L175 P16050	NM_001140.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000574640.1	ALOX15-002	2422	623aa	ENSP00000460483.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7ZA11 D3DTK1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000545513.1	ALOX15-202	2200	684aa	ENSP00000439855.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D3DTK1 F5H0G8 I3L175	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000572265.1	ALOX15-005	581	4aa	ENSP00000460430.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000576394.1	ALOX15-008	553	109aa	ENSP00000458630.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L175	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000573740.1	ALOX15-004	570	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000576572.1	ALOX15-006	487	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 1, Transcript length: 581 bps, Translation length: 4 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000572265.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000439137 (version 1)

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Transcript: ENST00000572265.1 ALOX15-005

Summary