Transcript: ENST00000293404.3 NAGS-001

Description

N-acetylglutamate synthase [Source:HGNC Symbol;Acc:17996]

Gene Synonyms

AGAS, ARGA, NAT7

Location

About this transcript

This transcript has 7 exons, is annotated with 11 domains and features, is associated with 2686 variant alleles and maps to 374 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000293404.3	NAGS-001	2182	534aa	ENSP00000293404.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11473	Q2NKP2 Q8N159	NM_153006.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000589767.1	NAGS-005	1995	511aa	ENSP00000465408.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EK11	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000592915.1	NAGS-002	1955	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 2,182 bps, Translation length: 534 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8N159

CCDS

This transcript is a member of the Human CCDS set: CCDS11473

Version

ENST00000293404.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000457660 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.