Transcript: ENST00000594549.1 ALDH16A1-007

Description

aldehyde dehydrogenase 16 family, member A1 [Source:HGNC Symbol;Acc:28114]

Gene Synonyms

MGC10204

Location

Chromosome 19: 49,971,550-49,973,846 forward strand.

About this transcript

This transcript has 3 exons, is associated with 1304 variant alleles and maps to 204 oligo probes.

Gene

This transcript is a product of gene ENSG00000161618.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000293350.4	ALDH16A1-001	3153	802aa	ENSP00000293350.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12766	F8WBH3 Q8IZ83	NM_153329.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000455361.2	ALDH16A1-003	2470	751aa	ENSP00000410142.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46141	Q8IZ83	NM_001145396.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000433981.2	ALDH16A1-201	2343	637aa	ENSP00000398675.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8WBH3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540132.1	ALDH16A1-002	2174	639aa	ENSP00000445088.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H4B6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000593417.1	ALDH16A1-004	2343	103aa	ENSP00000470160.1	Nonsense mediated decay		M0QYY1	-	-
ENST00000600265.1	ALDH16A1-008	819	163aa	ENSP00000469507.1	Nonsense mediated decay		M0QY06	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000598015.1	ALDH16A1-006	287	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000599652.1	ALDH16A1-005	3995	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000594549.1	ALDH16A1-007	681	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 681 bps,

Version

ENST00000594549.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000465364 (version 1)

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Transcript: ENST00000594549.1 ALDH16A1-007

Summary