Transcript: ENST00000293272.3 CCL5-001

Description

chemokine (C-C motif) ligand 5 [Source:HGNC Symbol;Acc:10632]

Gene Synonyms

D17S136E, MGC17164, RANTES, SCYA5, SIS-delta, SISd, TCP228, eoCP

Location

About this transcript

This transcript has 3 exons, is annotated with 10 domains and features, is associated with 3877 variant alleles and maps to 477 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000293272.3	CCL5-001	1365	91aa	ENSP00000293272.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11300	D0EI67 P13501	NM_002985.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000366113.3	CCL5-002	1244	91aa	ENSP00000375216.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11300	D0EI67 P13501	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000463941.1	CCL5-003	719	150aa	ENSP00000465234.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 1,365 bps, Translation length: 91 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P13501

CCDS

This transcript is a member of the Human CCDS set: CCDS11300

Version

ENST00000293272.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000256486 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.