Transcript: ENST00000584496.1 GRIN2C-003

Description

glutamate receptor, ionotropic, N-methyl D-aspartate 2C [Source:HGNC Symbol;Acc:4587]

Gene Synonyms

GluN2C, NMDAR2C, NR2C

Location

About this transcript

This transcript has 2 exons, is associated with 3600 variant alleles and maps to 111 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000293190.5	GRIN2C-001	4261	1233aa	ENSP00000293190.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32724	Q14957	NM_000835.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000347612.4	GRIN2C-002	2929	873aa	ENSP00000338645.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS62330	H0Y2V8 Q8IW23	NM_001278553.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000578159.1	GRIN2C-005	615	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000584176.1	GRIN2C-004	6516	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000584496.1	GRIN2C-003	1984	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 1,984 bps,

Version

ENST00000584496.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000444447 (version 1)