Transcript: ENST00000498283.1 ALKBH4-003

Description

alkB, alkylation repair homolog 4 (E. coli) [Source:HGNC Symbol;Acc:21900]

Gene Synonyms

ABH4, FLJ20013

Location

About this transcript

This transcript has 2 exons, is associated with 2666 variant alleles and maps to 102 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000292566.3	ALKBH4-001	2105	302aa	ENSP00000292566.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5723	Q9NXW9	NM_017621.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000490528.1	ALKBH4-002	1405	42aa	ENSP00000420362.1	Nonsense mediated decay		Q9NXW9	-	-
ENST00000498283.1	ALKBH4-003	549	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 549 bps,

Version

ENST00000498283.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000349505 (version 1)