Transcript: ENST00000480043.1 CYP3A4-002

Description

cytochrome P450, family 3, subfamily A, polypeptide 4 [Source:HGNC Symbol;Acc:2637]

Gene Synonyms

CP33, CP34, CYP3A, CYP3A3, CYPIIIA3, CYPIIIA4, HLP, NF-25, P450C3, P450PCN1

Location

About this transcript

This transcript has 5 exons, is associated with 4186 variant alleles and maps to 166 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000336411.2	CYP3A4-001	2153	503aa	ENSP00000337915.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5674	B4DPQ5 P08684 Q6GRK0 Q7Z448 Q9BZM0	NM_017460.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000354593.2	CYP3A4-201	2318	353aa	ENSP00000346607.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DPQ5 E7EVM8 Q9BZM0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000415003.1	CYP3A4-003	564	153aa	ENSP00000397208.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JBD2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000480043.1	CYP3A4-002	651	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 651 bps,

Version

ENST00000480043.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000345060 (version 1)