Transcript: ENST00000414115.1 SHC1-004

Description

SHC (Src homology 2 domain containing) transforming protein 1 [Source:HGNC Symbol;Acc:10840]

Gene Synonyms

SHC, SHCA, p66

Location

Chromosome 1: 154,938,468-154,941,369 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 9 domains and features, is associated with 1457 variant alleles and maps to 218 oligo probes.

Gene

This transcript is a product of gene ENSG00000160691.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000448116.2	SHC1-002	3481	584aa	ENSP00000401303.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44233	B4DL02 P29353 Q5T181 Q5T187 Q8NFT0 Q8NFT1	NM_001130040.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000368445.5	SHC1-001	3472	583aa	ENSP00000357430.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30881	P29353 Q5T181 Q5T187 Q8NFT0 Q8NFT1	NM_183001.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000368453.4	SHC1-006	3062	474aa	ENSP00000357438.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1076	P29353 Q5T181 Q5T187 Q8NFT0	NM_003029.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000368450.1	SHC1-007	3059	473aa	ENSP00000357435.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44234	P29353 Q5T181 Q5T187 Q8NFT0	NM_001202859.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000368449.4	SHC1-003	2879	354aa	ENSP00000357434.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T187	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000606391.1	SHC1-201	2659	384aa	ENSP00000475850.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T187	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000444664.1	SHC1-010	1305	297aa	ENSP00000396333.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000414115.1	SHC1-004	780	200aa	ENSP00000404908.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T188	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000366442.2	SHC1-009	780	137aa	ENSP00000396162.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T181 Q8NFT0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000412170.1	SHC1-008	692	200aa	ENSP00000398441.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T181 Q5T182 Q8NFT0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000444179.1	SHC1-005	550	129aa	ENSP00000398864.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T187	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000490667.1	SHC1-011	727	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 780 bps, Translation length: 200 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000414115.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000090782 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000414115.1 SHC1-004

Summary