Transcript: ENST00000291700.4 S100B-001

Description

S100 calcium binding protein B [Source:HGNC Symbol;Acc:10500]

Gene Synonyms

NEF, S100, S100-B, S100beta

Location

About this transcript

This transcript has 3 exons, is annotated with 10 domains and features, is associated with 3004 variant alleles and maps to 345 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000291700.4	S100B-001	877	92aa	ENSP00000291700.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13736	P04271	NM_006272.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367071.4	S100B-002	971	94aa	ENSP00000356038.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MRB1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397648.1	S100B-003	839	92aa	ENSP00000380769.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13736	P04271	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 877 bps, Translation length: 92 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P04271

CCDS

This transcript is a member of the Human CCDS set: CCDS13736

Version

ENST00000291700.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000207427 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.