Transcript: ENST00000518498.1 TFF3-001

Description

trefoil factor 3 (intestinal) [Source:HGNC Symbol;Acc:11757]

Gene Synonyms

HITF, ITF, P1B, TFI

Location

About this transcript

This transcript has 3 exons, is annotated with 13 domains and features, is associated with 1865 variant alleles and maps to 354 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000518498.1	TFF3-001	1109	94aa	ENSP00000430690.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33565	Q07654	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000291525.10	TFF3-201	1054	130aa	ENSP00000291525.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	NM_003226.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000398431.2	TFF3-002	452	125aa	ENSP00000381462.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000489676.1	TFF3-003	419	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 1,109 bps, Translation length: 94 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q07654

CCDS

This transcript is a member of the Human CCDS set: CCDS33565

Version

ENST00000518498.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000195358 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.