Transcript: ENST00000368814.3 THEM4-001

Description

thioesterase superfamily member 4 [Source:HGNC Symbol;Acc:17947]

Gene Synonyms

CTMP

Location

About this transcript

This transcript has 6 exons, is annotated with 5 domains and features, is associated with 14904 variant alleles and maps to 511 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000368814.3	THEM4-001	2377	240aa	ENSP00000357804.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1006	Q5T1C6	NM_053055.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000489410.1	THEM4-005	643	110aa	ENSP00000433304.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PLJ7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000471464.1	THEM4-002	1832	107aa	ENSP00000431288.1	Nonsense mediated decay		F6XC58	-	-
ENST00000477437.1	THEM4-004	687	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000483207.1	THEM4-003	2406	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 2,377 bps, Translation length: 240 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5T1C6

CCDS

This transcript is a member of the Human CCDS set: CCDS1006

Version

ENST00000368814.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000036615 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.