Transcript: ENST00000493673.1 PSMB4-007

Description

proteasome (prosome, macropain) subunit, beta type, 4 [Source:HGNC Symbol;Acc:9541]

Gene Synonyms

HN3, HsN3, PROS-26, PROS26

Location

Chromosome 1: 151,372,066-151,374,410 forward strand.

About this transcript

This transcript has 4 exons, is associated with 1303 variant alleles and maps to 479 oligo probes.

Gene

This transcript is a product of gene ENSG00000159377.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000290541.6	PSMB4-001	964	264aa	ENSP00000290541.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS996	P28070	NM_002796.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000476467.1	PSMB4-003	2067	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000493673.1	PSMB4-007	1650	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000495288.1	PSMB4-002	986	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000495805.1	PSMB4-004	811	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000474100.1	PSMB4-005	755	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000466425.1	PSMB4-006	665	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,650 bps,

Version

ENST00000493673.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000034891 (version 2)

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Transcript: ENST00000493673.1 PSMB4-007

Summary