Description
SNF8, ESCRT-II complex subunit [Source:HGNC Symbol;Acc:17028]
Gene Synonyms
Dot3, EAP30, VPS22
Location
Chromosome 17: 47,009,005-47,022,109 reverse strand.
About this transcript
This transcript has 9 exons, is annotated with 6 domains and features, is associated with 6379 variant alleles and maps to 216 oligo probes.
Gene
This transcript is a product of gene ENSG00000159210.5 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000502492.1 | SNF8-001 | 2319 | 258aa | ENSP00000421380.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS11541 | D6RJ86 Q96H20 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000290330.3 | SNF8-002 | 951 | 257aa | ENSP00000290330.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RJ86 Q96H20 | NM_007241.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000510558.2 | SNF8-006 | 1051 | 167aa | ENSP00000421390.2 | Nonsense mediated decay | D6RFY6 D6RJ86 | - | - | |
| ENST00000514929.1 | SNF8-004 | 775 | 141aa | ENSP00000427328.1 | Nonsense mediated decay | D6RJ86 | - | - | |
| ENST00000507302.2 | SNF8-007 | 742 | 103aa | ENSP00000422701.1 | Nonsense mediated decay | D6RBI1 | - | - | |
| ENST00000576353.1 | SNF8-016 | 700 | 53aa | ENSP00000460001.1 | Nonsense mediated decay | I3L2X5 | - | - | |
| ENST00000509989.1 | SNF8-011 | 677 | 16aa | ENSP00000467548.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000573795.1 | SNF8-017 | 583 | 36aa | ENSP00000460981.1 | Nonsense mediated decay | I3L457 | - | - | |
| ENST00000509995.1 | SNF8-008 | 560 | 81aa | ENSP00000421956.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000514089.1 | SNF8-015 | 571 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000504000.1 | SNF8-003 | 1899 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000512243.1 | SNF8-009 | 863 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000515174.1 | SNF8-010 | 823 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000515572.1 | SNF8-012 | 687 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000506104.1 | SNF8-014 | 455 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000510195.1 | SNF8-005 | 445 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000511214.1 | SNF8-013 | 429 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |