Transcript: ENST00000545369.2 IFNGR2-004

Description

interferon gamma receptor 2 (interferon gamma transducer 1) [Source:HGNC Symbol;Acc:5440]

Gene Synonyms

AF-1, IFGR2, IFNGT1

Location

Chromosome 21: 34,775,747-34,809,251 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 3 domains and features, is associated with 14684 variant alleles and maps to 335 oligo probes.

Gene

This transcript is a product of gene ENSG00000159128.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000290219.6	IFNGR2-001	2221	337aa	ENSP00000290219.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33544	A1Z2N6 A8K881 B5MCZ0 P38484	NM_005534.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000381995.1	IFNGR2-002	1742	356aa	ENSP00000371425.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A1Z2N6 B5MCZ0 E7EUY1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000405436.1	IFNGR2-007	1684	258aa	ENSP00000385044.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B5MCZ0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000421802.1	IFNGR2-005	727	60aa	ENSP00000402629.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000545369.2	IFNGR2-004	966	37aa	ENSP00000442735.2	Nonsense mediated decay		F8WE34	-	-
ENST00000439213.1	IFNGR2-003	906	70aa	ENSP00000407541.1	Nonsense mediated decay		F8WF11	-	-

Summary

Statistics

Exons: 6, Coding exons: 2, Transcript length: 966 bps, Translation length: 37 residues

Version

ENST00000545369.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000139919 (version 3)

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Transcript: ENST00000545369.2 IFNGR2-004

Summary