Transcript: ENST00000602966.1 F11R-003

Description

F11 receptor [Source:HGNC Symbol;Acc:14685]

Gene Synonyms

CD321, JAM, JAM-1, JAM-A, JAM1, JAMA, JCAM, KAT, PAM-1

Location

About this transcript

This transcript has 3 exons, is associated with 9111 variant alleles and maps to 193 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000368026.6	F11R-001	4835	299aa	ENSP00000357005.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1213	Q6FIB4 Q9Y624	NM_016946.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537746.1	F11R-002	1245	250aa	ENSP00000440812.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z941	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000472573.1	F11R-004	577	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000335772.3	F11R-005	571	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000602966.1	F11R-003	558	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 558 bps,

Version

ENST00000602966.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000071460 (version 3)