Transcript: ENST00000537746.1 F11R-002

Description

F11 receptor [Source:HGNC Symbol;Acc:14685]

Gene Synonyms

CD321, JAM, JAM-1, JAM-A, JAM1, JAMA, JCAM, KAT, PAM-1

Location

About this transcript

This transcript has 9 exons, is annotated with 16 domains and features, is associated with 10112 variant alleles and maps to 334 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000368026.6	F11R-001	4835	299aa	ENSP00000357005.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1213	Q6FIB4 Q9Y624	NM_016946.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537746.1	F11R-002	1245	250aa	ENSP00000440812.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z941	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000472573.1	F11R-004	577	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000335772.3	F11R-005	571	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000602966.1	F11R-003	558	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,245 bps, Translation length: 250 residues

Version

ENST00000537746.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000071459 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.