Transcript: ENST00000289388.3 C2orf62-001

Description

chromosome 2 open reading frame 62 [Source:HGNC Symbol;Acc:25062]

Gene Synonyms

MGC50811

Location

About this transcript

This transcript has 10 exons, is annotated with 4 domains and features, is associated with 5848 variant alleles and maps to 312 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000289388.3	C2orf62-001	1323	387aa	ENSP00000289388.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2414	Q7Z7H3	NM_198559.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000481940.1	C2orf62-002	770	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000494447.1	C2orf62-003	2383	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000480532.1	C2orf62-004	743	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000495773.1	C2orf62-005	666	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,323 bps, Translation length: 387 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q7Z7H3

CCDS

This transcript is a member of the Human CCDS set: CCDS2414

Version

ENST00000289388.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000256771 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.