Transcript: ENST00000289359.2 MITD1-001

Description

MIT, microtubule interacting and transport, domain containing 1 [Source:HGNC Symbol;Acc:25207]

Gene Synonyms

LOC129531

Location

Chromosome 2: 99,785,726-99,797,521 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 6 domains and features, is associated with 4748 variant alleles and maps to 313 oligo probes.

Gene

This transcript is a product of gene ENSG00000158411.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000289359.2	MITD1-001	939	249aa	ENSP00000289359.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2040	H7C3Q6 Q8WV92	NM_138798.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000422537.2	MITD1-009	971	231aa	ENSP00000413371.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C3Q6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000409107.1	MITD1-004	662	197aa	ENSP00000387316.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B8ZZL5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000438121.1	MITD1-002	999	53aa	ENSP00000408117.1	Nonsense mediated decay		F8WED5	-	-
ENST00000466880.1	MITD1-006	579	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000487588.1	MITD1-007	482	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000413710.1	MITD1-005	401	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000464685.1	MITD1-003	3270	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000483721.1	MITD1-008	714	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 939 bps, Translation length: 249 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8WV92

CCDS

This transcript is a member of the Human CCDS set: CCDS2040

Version

ENST00000289359.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000253126 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000289359.2 MITD1-001

Summary