Transcript: ENST00000399583.3 RADIL-001

Description

Ras association and DIL domains [Source:HGNC Symbol;Acc:22226]

Gene Synonyms

FLJ10324, KIAA1849, RASIP2

Location

Chromosome 7: 4,838,736-4,923,350 reverse strand.

About this transcript

This transcript has 15 exons, is annotated with 24 domains and features, is associated with 48528 variant alleles and maps to 490 oligo probes.

Gene

This transcript is a product of gene ENSG00000157927.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000399583.3	RADIL-001	3689	1075aa	ENSP00000382492.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43544	C9J7G0 F5H6X3 Q96JH8	NM_018059.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000536091.1	RADIL-201	3469	542aa	ENSP00000442533.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z2I1 C9J7G0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538469.1	RADIL-202	3083	835aa	ENSP00000442966.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H6X3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000457174.1	RADIL-006	567	134aa	ENSP00000398057.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J7G0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000445392.1	RADIL-002	5669	407aa	ENSP00000413403.1	Nonsense mediated decay		C9J7G0 F8WEM1	-	-
ENST00000473130.1	RADIL-004	2108	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000472999.1	RADIL-003	1525	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000484211.1	RADIL-005	764	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000469399.1	RADIL-007	528	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 15, Coding exons: 14, Transcript length: 3,689 bps, Translation length: 1,075 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96JH8

CCDS

This transcript is a member of the Human CCDS set: CCDS43544

Version

ENST00000399583.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000323769 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000399583.3 RADIL-001

Summary