Transcript: ENST00000514582.1 KIT-003

Description

v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog [Source:HGNC Symbol;Acc:6342]

Gene Synonyms

C-Kit, CD117, PBT, SCFR

Location

About this transcript

This transcript has 2 exons, is associated with 17164 variant alleles and maps to 66 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000288135.5	KIT-001	5186	976aa	ENSP00000288135.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3496	P10721 Q8TCG9	NM_001093772.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000412167.2	KIT-002	3470	972aa	ENSP00000390987.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47058	P10721 Q8TCG9	-	-
ENST00000512959.1	KIT-004	746	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000514582.1	KIT-003	538	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 538 bps,

Version

ENST00000514582.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000361418 (version 1)