Transcript: ENST00000311852.6 MMP14-001

Description

matrix metallopeptidase 14 (membrane-inserted) [Source:HGNC Symbol;Acc:7160]

Gene Synonyms

MMP-14, MMP-X1, MT-MMP, MT-MMP 1, MT1-MMP, MT1MMP, MTMMP1, WNCHRS

Location

Chromosome 14: 23,305,766-23,316,970 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 36 domains and features, is associated with 5781 variant alleles and maps to 759 oligo probes.

Gene

This transcript is a product of gene ENSG00000157227.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000311852.6	MMP14-001	3732	582aa	ENSP00000308208.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9577	P50281	NM_004995.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000548761.1	MMP14-007	582	194aa	ENSP00000446989.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W1B7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000547279.1	MMP14-006	412	71aa	ENSP00000450323.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VP90	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000548162.1	MMP14-003	1740	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000547596.1	MMP14-008	575	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000547074.1	MMP14-005	560	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 3,732 bps, Translation length: 582 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P50281

CCDS

This transcript is a member of the Human CCDS set: CCDS9577

Version

ENST00000311852.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000071660 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000311852.6 MMP14-001

Summary