Transcript: ENST00000367547.3 SHCBP1L-001

Description

SHC SH2-domain binding protein 1-like [Source:HGNC Symbol;Acc:16788]

Gene Synonyms

C1orf14, GE36

Location

About this transcript

This transcript has 10 exons, is annotated with 12 domains and features, is associated with 24492 variant alleles and maps to 408 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000367547.3	SHCBP1L-001	2317	653aa	ENSP00000356518.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30955	Q9BZQ2	NM_030933.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000423786.1	SHCBP1L-201	1722	534aa	ENSP00000397308.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9BZQ2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000488956.1	SHCBP1L-002	2540	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000483655.1	SHCBP1L-004	2023	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497549.2	SHCBP1L-003	740	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467208.1	SHCBP1L-005	692	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 2,317 bps, Translation length: 653 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BZQ2

CCDS

This transcript is a member of the Human CCDS set: CCDS30955

Version

ENST00000367547.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000085956 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.