Transcript: ENST00000521496.1 ATAD2-004

Description

ATPase family, AAA domain containing 2 [Source:HGNC Symbol;Acc:30123]

Gene Synonyms

ANCCA, DKFZp667N1320, MGC29843, MGC5254, PRO2000

Location

Chromosome 8: 124,356,753-124,408,641 reverse strand.

About this transcript

This transcript has 19 exons, is associated with 23872 variant alleles and maps to 472 oligo probes.

Gene

This transcript is a product of gene ENSG00000156802.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000287394.5	ATAD2-001	5565	1390aa	ENSP00000287394.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6343	Q6PL18	NM_014109.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000521903.1	ATAD2-002	5143	708aa	ENSP00000429213.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000517666.1	ATAD2-003	4995	64aa	ENSP00000429331.1	Nonsense mediated decay		E5RIP2	-	-
ENST00000519124.1	ATAD2-005	4650	63aa	ENSP00000429617.1	Nonsense mediated decay		E5RHW7	-	-
ENST00000534257.1	ATAD2-007	544	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000521496.1	ATAD2-004	3133	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000550993.1	ATAD2-008	438	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000530065.1	ATAD2-006	411	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 19, Coding exons: 0, Transcript length: 3,133 bps,

Version

ENST00000521496.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000381769 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000521496.1 ATAD2-004

Summary