Transcript: ENST00000337672.2 MED19-001

Description

mediator complex subunit 19 [Source:HGNC Symbol;Acc:29600]

Gene Synonyms

DT2P1G7, LCMR1

Location

About this transcript

This transcript has 4 exons, is annotated with 5 domains and features, is associated with 3993 variant alleles and maps to 346 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000337672.2	MED19-001	1515	194aa	ENSP00000337340.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7966	A0JLT2	NM_153450.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000431606.2	MED19-002	1089	244aa	ENSP00000416227.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KR33	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000528205.1	MED19-004	1088	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000534677.1	MED19-003	740	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,515 bps, Translation length: 194 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A0JLT2

CCDS

This transcript is a member of the Human CCDS set: CCDS7966

Version

ENST00000337672.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000393701 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.