Transcript: ENST00000527022.1 UBE2L6-004

Description

ubiquitin-conjugating enzyme E2L 6 [Source:HGNC Symbol;Acc:12490]

Gene Synonyms

RIG-B, UBCH8

Location

Chromosome 11: 57,319,898-57,334,799 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 7 domains and features, is associated with 6425 variant alleles and maps to 266 oligo probes.

Gene

This transcript is a product of gene ENSG00000156587.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000287156.4	UBE2L6-001	1354	153aa	ENSP00000287156.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7960	E9PKW8 O14933	NM_004223.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000340573.4	UBE2L6-002	1573	87aa	ENSP00000341980.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7961	E9PKW8 O14933	NM_198183.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000527022.1	UBE2L6-004	668	65aa	ENSP00000435265.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PKW8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000526659.1	UBE2L6-005	628	127aa	ENSP00000434348.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PQT7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000528275.1	UBE2L6-006	605	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 668 bps, Translation length: 65 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000527022.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000392659 (version 1)

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Transcript: ENST00000527022.1 UBE2L6-004

Summary