Transcript: ENST00000338602.2 SLC28A1-002

Description

solute carrier family 28 (concentrative nucleoside transporter), member 1 [Source:HGNC Symbol;Acc:11001]

Gene Synonyms

CNT1, HCNT1

Location

Chromosome 15: 85,427,885-85,439,277 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 5 domains and features, is associated with 5779 variant alleles and maps to 307 oligo probes.

Gene

This transcript is a product of gene ENSG00000156222.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000394573.1	SLC28A1-201	2750	649aa	ENSP00000378074.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10334	O00337	NM_004213.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000286749.3	SLC28A1-001	2636	649aa	ENSP00000286749.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10334	O00337	NM_001287762.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537624.1	SLC28A1-203	2237	636aa	ENSP00000444700.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H560	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537216.1	SLC28A1-202	1934	543aa	ENSP00000440546.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z533	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538177.1	SLC28A1-205	1590	483aa	ENSP00000443752.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z3L6	NM_001287761.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000338602.2	SLC28A1-002	1360	175aa	ENSP00000341629.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10335	O00337	NM_201651.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537703.1	SLC28A1-204	1300	287aa	ENSP00000443764.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z3M4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 7, Coding exons: 5, Transcript length: 1,360 bps, Translation length: 175 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O00337

CCDS

This transcript is a member of the Human CCDS set: CCDS10335

Version

ENST00000338602.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000308999 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000338602.2 SLC28A1-002

Summary